STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SYT17Synaptotagmin-17. (473 aa)    
Predicted Functional Partners:
ITSN2
Intersectin-2.
     
 0.683
CLEC19A
C-type lectin domain containing 19A.
 
   
 0.677
NT5DC3
5'-nucleotidase domain-containing protein 3.
      
 0.564
RIMS2
Regulating synaptic membrane exocytosis protein 2.
     
0.542
STON2
Stonin-2; Belongs to the Stoned B family.
  
 0.534
MRPL13
39S ribosomal protein L13, mitochondrial.
      
 0.514
ITSN1
Intersectin-1.
     
 0.478
SAXO2
Protein FAM154B.
  
  
  0.418
MAB21L3
Protein mab-21-like 3.
  
    0.404
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.