STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NELFCDNegative elongation factor D. (583 aa)    
Predicted Functional Partners:
NELFA
Negative elongation factor A.
    
 0.994
NELFB
Negative elongation factor B.
   
 0.993
NELFE
Negative elongation factor E.
    
 0.992
SUPT5H
Transcription elongation factor SPT5.
    
 0.936
POLR2A
DNA-directed RNA polymerase II subunit RPB1.
    
 0.936
C1GALT1
Glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1.
    
 0.926
SUPT4H1
Transcription elongation factor SPT4; Component of the DRB sensitivity-inducing factor complex (DSIF complex), which regulates transcription elongation by RNA polymerase II; Belongs to the SPT4 family.
    
 0.908
POLR2F
DNA-directed RNA polymerases I, II, and III subunit RPABC2.
   
  0.883
POLR2B
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 0.881
POLR2C
DNA-directed RNA polymerase II subunit RPB3.
    
 0.879
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.