Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ARID4B | RSRC2 | ENSLSDP00000023019 | ENSLSDP00000006380 | AT-rich interactive domain-containing protein 4B. | Arginine/serine-rich coiled-coil protein 2. | 0.646 |
C9orf85 | RSRC2 | ENSLSDP00000024258 | ENSLSDP00000006380 | Uncharacterized protein C9orf85. | Arginine/serine-rich coiled-coil protein 2. | 0.476 |
ENSLSDP00000024472 | RBM25 | ENSLSDP00000024472 | ENSLSDP00000024474 | annotation not available | RNA-binding protein 25. | 0.900 |
ENSLSDP00000024472 | RSRC2 | ENSLSDP00000024472 | ENSLSDP00000006380 | annotation not available | Arginine/serine-rich coiled-coil protein 2. | 0.657 |
ENSLSDP00000024472 | YTHDC1 | ENSLSDP00000024472 | ENSLSDP00000006684 | annotation not available | YTH domain-containing protein 1. | 0.450 |
KITLG | RSRC2 | ENSLSDP00000023715 | ENSLSDP00000006380 | Kit ligand; Ligand for the receptor-type protein-tyrosine kinase KIT. Plays an essential role in the regulation of cell survival and proliferation, hematopoiesis, stem cell maintenance, gametogenesis, mast cell development, migration and function, and in melanogenesis. Belongs to the SCF family. | Arginine/serine-rich coiled-coil protein 2. | 0.423 |
MIER2 | RSRC2 | ENSLSDP00000011823 | ENSLSDP00000006380 | Mesoderm induction early response protein 2. | Arginine/serine-rich coiled-coil protein 2. | 0.509 |
RBM25 | ENSLSDP00000024472 | ENSLSDP00000024474 | ENSLSDP00000024472 | RNA-binding protein 25. | annotation not available | 0.900 |
RBM25 | RSRC2 | ENSLSDP00000024474 | ENSLSDP00000006380 | RNA-binding protein 25. | Arginine/serine-rich coiled-coil protein 2. | 0.657 |
RBM25 | YTHDC1 | ENSLSDP00000024474 | ENSLSDP00000006684 | RNA-binding protein 25. | YTH domain-containing protein 1. | 0.450 |
RSRC2 | ARID4B | ENSLSDP00000006380 | ENSLSDP00000023019 | Arginine/serine-rich coiled-coil protein 2. | AT-rich interactive domain-containing protein 4B. | 0.646 |
RSRC2 | C9orf85 | ENSLSDP00000006380 | ENSLSDP00000024258 | Arginine/serine-rich coiled-coil protein 2. | Uncharacterized protein C9orf85. | 0.476 |
RSRC2 | ENSLSDP00000024472 | ENSLSDP00000006380 | ENSLSDP00000024472 | Arginine/serine-rich coiled-coil protein 2. | annotation not available | 0.657 |
RSRC2 | KITLG | ENSLSDP00000006380 | ENSLSDP00000023715 | Arginine/serine-rich coiled-coil protein 2. | Kit ligand; Ligand for the receptor-type protein-tyrosine kinase KIT. Plays an essential role in the regulation of cell survival and proliferation, hematopoiesis, stem cell maintenance, gametogenesis, mast cell development, migration and function, and in melanogenesis. Belongs to the SCF family. | 0.423 |
RSRC2 | MIER2 | ENSLSDP00000006380 | ENSLSDP00000011823 | Arginine/serine-rich coiled-coil protein 2. | Mesoderm induction early response protein 2. | 0.509 |
RSRC2 | RBM25 | ENSLSDP00000006380 | ENSLSDP00000024474 | Arginine/serine-rich coiled-coil protein 2. | RNA-binding protein 25. | 0.657 |
RSRC2 | TRA2A | ENSLSDP00000006380 | ENSLSDP00000001460 | Arginine/serine-rich coiled-coil protein 2. | Transformer-2 alpha. | 0.432 |
RSRC2 | YTHDC1 | ENSLSDP00000006380 | ENSLSDP00000006684 | Arginine/serine-rich coiled-coil protein 2. | YTH domain-containing protein 1. | 0.517 |
RSRC2 | ZCCHC8 | ENSLSDP00000006380 | ENSLSDP00000006375 | Arginine/serine-rich coiled-coil protein 2. | Zinc finger CCHC domain-containing protein 8. | 0.460 |
RSRC2 | ZNF277 | ENSLSDP00000006380 | ENSLSDP00000001657 | Arginine/serine-rich coiled-coil protein 2. | Zinc finger protein 277. | 0.460 |
page 1 of 2