STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VAPBVesicle-associated membrane protein-associated protein B. (243 aa)    
Predicted Functional Partners:
PITPNM1
Membrane-associated phosphatidylinositol transfer protein 1.
    
 
 0.732
VAPA
Vesicle-associated membrane protein-associated protein A.
  
0.718
OSBPL9
Oxysterol-binding protein; Belongs to the OSBP family.
   
 
 0.709
STARD3-2
StAR-related lipid transfer protein 3.
    
 
 0.656
STARD3
StAR-related lipid transfer protein 3.
    
 
 0.656
PPM1L
Protein phosphatase 1L.
    
 0.645
OSBP
Oxysterol-binding protein; Belongs to the OSBP family.
    
 0.644
OSBP2
Oxysterol-binding protein; Belongs to the OSBP family.
    
 0.644
BCAP31
Uncharacterized protein.
   
 0.636
BCAP29
B-cell receptor-associated protein 29.
   
 0.636
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.