STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSLSDP00000006398annotation not available (99 aa)    
Predicted Functional Partners:
ENSLSDP00000008068
annotation not available
   
 0.999
RPL21
60S ribosomal protein L21.
   
 0.994
RPL5
60S ribosomal protein L5.
  
 0.994
RPL13
60S ribosomal protein L13; Belongs to the eukaryotic ribosomal protein eL13 family.
   
 0.993
RPL14
60S ribosomal protein L14.
  
 0.993
RPL35A
60S ribosomal protein L35a.
   
 0.992
RPL30
60S ribosomal protein L30.
   
 0.992
LOC110478718
60S ribosomal protein L17; Belongs to the universal ribosomal protein uL22 family.
  
 0.992
RPL24
60S ribosomal protein L24.
   
 0.992
RPL8
60S ribosomal protein L8.
  
 0.992
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.