Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
C20orf85Uncharacterized protein C20orf85. (116 aa)    
Predicted Functional Partners:
ENSLSDP00000006696
annotation not available
   
   0.789
TEKT1
Tektin-1.
   
   0.787
CUNH5orf49
Uncharacterized protein C5orf49.
   
   0.778
FAM183A
Protein FAM183A.
   
   0.776
EFCAB10
Uncharacterized protein.
   
 
 0.767
CUNH9orf116
UPF0691 protein C9orf116.
   
   0.760
TEKT2
Tektin-2.
   
   0.753
TEKT4
Tektin-4.
   
   0.742
PACRG
Parkin coregulated gene protein.
    
 
 0.735
LOC110472786
Coiled-coil domain-containing protein 173.
   
   0.731
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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