Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MYL2Myosin light chain 2. (171 aa)    
Predicted Functional Partners:
MYL1
Myosin light chain 1, skeletal muscle isoform.
   
 0.830
MYL3
Myosin light chain 1, cardiac muscle.
   
 0.798
MYL4
Myosin light chain, embryonic.
   
 0.798
TNNC1
Troponin C, slow skeletal and cardiac muscles.
   
 0.781
MB
Myoglobin; Serves as a reserve supply of oxygen and facilitates the movement of oxygen within muscles.
   
 
 0.752
TNNI2
Troponin I, fast skeletal muscle.
   
 0.747
ENSLSDP00000004841
annotation not available
   
 0.697
TNNI1
Troponin I, slow skeletal muscle.
   
 0.697
CSRP3
Cysteine and glycine-rich protein 3.
   
  
 0.696
MYOC
Myocilin.
    
 
 0.660
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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