Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TMSB4XThymosin, beta 4. (64 aa)    
Predicted Functional Partners:
CLASP1
CLIP-associating protein 1.
      
 0.591
RPL5
60S ribosomal protein L5.
   
   0.562
TPT1
Translationally-controlled tumor; Belongs to the TCTP family.
   
    0.536
SPART
Spartin.
      
 0.531
FAIM
Fas apoptotic inhibitory molecule 1.
      
 0.499
RPS15
40S ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family.
   
  
 0.490
RPS2
40S ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family.
   
  
 0.479
RPL27A
60S ribosomal protein L27a; Belongs to the universal ribosomal protein uL15 family.
   
  
 0.471
PFN2
Profilin; Belongs to the profilin family.
   
 
 0.456
CLASP2
CLIP-associating protein 2.
      
 0.455
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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