Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC110473744Centrosomal protein. (506 aa)    
Predicted Functional Partners:
CEP63
Centrosomal protein.
   
 
 0.908
ENSLSDP00000000248
annotation not available
   
 
 0.717
TRIP13
Pachytene checkpoint protein 2; Belongs to the AAA ATPase family.
      
 0.569
PLK1
Serine/threonine-protein kinase PLK.
     
 0.558
MAPRE1
Microtubule-associated protein RP/EB family member 1.
      
 0.521
CEP290
Centrosomal protein.
   
 
 0.503
CCDC67
Deuterosome protein 1.
   
 
 0.444
POC5
Centrosomal protein POC5.
   
  
 0.444
CETN2
Centrin-2.
     
 0.437
LOC110484369
Centrin-1.
     
 0.437
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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