Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene fusion
Co-occurrence
Co-expression
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[Homology]
Score
PLEKHJ1Pleckstrin y domain-containing family J member 1. (349 aa)    
Predicted Functional Partners:
GLG1
Golgi apparatus protein 1.
      
 0.666
GABRA5
Gamma-aminobutyric acid receptor subunit alpha-5; Belongs to the ligand-gated ion channel (TC 1.A.9) family.
      
 0.657
SPIRE2
Protein spire 2.
    
 
 0.607
PREPL
Prolyl endopeptidase-like.
      
 0.598
CENPC
Centromere protein C.
     
 0.582
FANCA
Fanconi anemia group A protein.
    
 0.580
GPATCH1
G patch domain-containing protein 1.
      
 0.570
NCOA5
Nuclear receptor coactivator 5.
    
 0.542
PTPRC
Receptor-type tyrosine-protein phosphatase C.
    
 0.524
RFC3
Replication factor C subunit 3.
     
 0.452
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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