Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BRAPBRCA1-associated protein. (591 aa)    
Predicted Functional Partners:
EVC
Ellis-van Creveld syndrome.
    
 
 0.878
HECTD4
Putative E3 ubiquitin-protein ligase HECTD4.
      
 0.874
GGA3
ADP-ribosylation factor-binding protein GGA3.
      
 0.874
BRCA1
Breast cancer type 1 susceptibility.
    
 
 0.776
KSR2
Kinase suppressor of Ras 2.
    
 0.714
ENSLSDP00000018430
annotation not available
    
 0.714
KSR1
Kinase suppressor of Ras 1.
    
 0.714
KSR1-2
Kinase suppressor of Ras 1 isoform X1.
    
 0.714
ATXN2
Ataxin-2.
 
    
 0.700
SLC17A5
Sialin.
      
 0.676
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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