Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
ACBD7Acyl-CoA-binding protein. (87 aa)    
Predicted Functional Partners:
SCP2
Non-specific lipid-transfer protein; Belongs to the thiolase-like superfamily. Thiolase family.
   
 0.661
VPS36
Vacuolar protein-sorting-associated protein 36.
      
 0.580
HADHB
Trifunctional enzyme subunit beta, mitochondrial; Belongs to the thiolase-like superfamily. Thiolase family.
   
 
 0.550
MEIG1
Meiosis-expressed gene 1 protein.
      
 0.543
GCC2
GRIP and coiled-coil domain-containing protein 2.
    
 
 0.535
ACOX3
Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family.
   
 0.529
HSDL2
Hydroxysteroid dehydrogenase-like protein 2.
   
 0.527
ACAA1
3-ketoacyl-CoA thiolase B, peroxisomal; Belongs to the thiolase-like superfamily. Thiolase family.
   
 
 0.526
COL26A1
Collagen alpha-1(XXVI) chain-like.
      
 0.513
ACAA2
3-ketoacyl-CoA thiolase, mitochondrial; Belongs to the thiolase-like superfamily. Thiolase family.
   
 
 0.512
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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