Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
NINNinein. (2085 aa)    
Predicted Functional Partners:
CDK6
Cyclin-dependent kinase 6; Belongs to the protein kinase superfamily.
      
 0.872
CEP164
Centrosomal protein.
    
 0.844
NEDD9
Enhancer of filamentation 1.
    
 
 0.838
DCTN1
Dynactin subunit 1.
    
 
 0.836
CEP83
Centrosomal protein.
    
 0.801
GSK3B
Glycogen synthase kinase-3 beta; Belongs to the protein kinase superfamily.
    
 
 0.783
CEP170
Centrosomal protein.
    
 
 0.777
WASL
Neural Wiskott-Aldrich syndrome protein.
   
 
 0.762
BBS4
Bardet-Biedl syndrome 4 protein.
    
 
 0.730
ARL13B
ADP-ribosylation factor-like protein 13B.
      
 0.723
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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