Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
CROTPeroxisomal carnitine O-octanoyltransferase. (612 aa)    
Predicted Functional Partners:
SCP2
Non-specific lipid-transfer protein; Belongs to the thiolase-like superfamily. Thiolase family.
   
 
 0.811
GNPAT
Dihydroxyacetone phosphate acyltransferase.
     
 0.769
ACOX3
Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family.
   
 
 0.762
PEX12
Peroxisome assembly protein 12; Required for protein import into peroxisomes. Belongs to the pex2/pex10/pex12 family.
     
 0.744
HADHB
Trifunctional enzyme subunit beta, mitochondrial; Belongs to the thiolase-like superfamily. Thiolase family.
   
  
 0.731
ECI2
Enoyl-CoA delta isomerase 2, mitochondrial.
   
 
 0.712
AMACR
Alpha-methylacyl-CoA racemase.
     
 0.688
RUNDC3B
RUN domain-containing protein 3B.
      
 0.682
HSDL2
Hydroxysteroid dehydrogenase-like protein 2.
   
 
 0.680
ACOT8
Acyl-coenzyme A thioesterase 8.
     
 0.671
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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