STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LEPROTL1Leptin receptor overlapping transcript-like 1. (140 aa)    
Predicted Functional Partners:
TMEM50A
Transmembrane protein 50A.
   
 
 0.912
TMEM50B
Transmembrane protein 50B.
   
 
 0.788
NAA30
N-alpha-acetyltransferase 30.
      
 0.550
TM4SF1_2
Transmembrane 4 L6 family member 1.
      
 0.550
MOCS1
Molybdenum cofactor biosynthesis protein 1.
      
 0.497
SHISA4
Protein shisa-4.
      
 0.459
KLHL15
Kelch-like protein 15.
      
 0.437
SNAPC3
snRNA-activating protein complex subunit 3.
      
 0.410
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.