STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EPHA5Ephrin type-A receptor 5. (1019 aa)    
Predicted Functional Partners:
EFNA5
Ephrin-A5; Belongs to the ephrin family.
   
 0.800
EFNA2
Ephrin-A2; Belongs to the ephrin family.
   
 0.757
ITSN2
Intersectin-2.
   
 0.714
EFNA3
Ephrin-A3; Belongs to the ephrin family.
   
 0.694
FZD4
Frizzled-4; Belongs to the G-protein coupled receptor Fz/Smo family.
    
 0.692
EFNB2
Ephrin-B2.
   
 0.690
ITSN1
Intersectin-1.
    
 0.618
EFNB1
Ephrin-B1; Belongs to the ephrin family.
   
 0.618
EFNA1
Ephrin-A1.
   
 0.529
BIRC6
Baculoviral IAP repeat-containing protein 6.
   
 0.424
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.