Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TLL2Metalloendopeptidase. (1046 aa)    
Predicted Functional Partners:
CHRD
Chordin; Belongs to the chordin family.
   
 
 0.822
PCOLCE2
Procollagen C-endopeptidase enhancer 2.
   
 0.696
GRIN2B
Glutamate receptor ionotropic, NMDA 2B.
     
  0.529
GDF11
Growth/differentiation factor 11.
    
 
 0.523
MSTN
Growth/differentiation factor 8.
    
 
 0.523
SCARA5
Scavenger receptor class A member 5.
     
 0.456
BMP4
Bone morphogenetic protein 4.
    
 
 0.440
BMP2
Bone morphogenetic protein 2.
    
 
 0.440
EFNA5
Ephrin-A5; Belongs to the ephrin family.
      
 0.439
IGSF21
Immunoglobulin superfamily member 21.
      
 0.434
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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