Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SRISorcin. (197 aa)    
Predicted Functional Partners:
NUDCD1
NudC domain-containing protein 1.
    
   0.785
ANXA13
Annexin.
   
 
 0.697
ANXA7
Annexin.
   
 
 0.697
ANXA11
Annexin.
   
 
 0.667
STOM
Erythrocyte band 7 integral membrane protein.
      
 0.663
PDCD6IP
Programmed cell death 6-interacting protein.
    
 
 0.601
NEK8
Serine/threonine-protein kinase Nek8.
      
 0.529
RYR2
Ryanodine receptor 2.
    
 
 0.520
RYR3
Ryanodine receptor 3.
    
 
 0.520
DNAJA3
DnaJ subfamily A member 3, mitochondrial.
      
 0.509
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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