STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDC42BPBSerine/threonine-protein kinase MRCK beta; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. (1731 aa)    
Predicted Functional Partners:
UBXN2B
UBX domain-containing protein 2B.
    
 0.752
RND1
Rho-related GTP-binding protein Rho6.
   
 0.648
RND3
Rho-related GTP-binding protein RhoE.
   
 0.648
RHOC
Rho-related GTP-binding protein RhoC.
   
 0.648
RHOA
Transforming protein RhoA.
   
 0.648
RHOB
Rho-related GTP-binding protein RhoB.
   
 0.648
ARHGEF18
Rho guanine nucleotide exchange factor 18.
   
 0.646
SNAP25
Synaptosomal-associated protein; Belongs to the SNAP-25 family.
    
 0.636
RHOD
Rho-related GTP-binding protein RhoD.
   
 0.590
RHOF
Rho-related GTP-binding protein RhoF.
   
 0.590
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
Server load: medium (54%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.