STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SORCS3VPS10 domain-containing receptor SorCS3. (1218 aa)    
Predicted Functional Partners:
GAK
Cyclin-G-associated kinase.
     
 0.941
DNAJC6
Putative tyrosine-protein phosphatase auxilin.
     
 0.617
IGF2R
Cation-independent mannose-6-phosphate receptor.
    
 0.570
VPS35
Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting.
    
 
 0.569
GGA2
ADP-ribosylation factor-binding protein GGA2.
    
 
 0.567
GGA1
ADP-ribosylation factor-binding protein GGA1.
    
 
 0.567
PSMB5
Proteasome subunit beta type-5.
    
 
 0.528
PSMA7
Proteasome subunit alpha type.
    
 
 0.522
PSMB1
Proteasome subunit beta.
    
 
 0.522
PSMA1
Proteasome subunit alpha type.
    
 
 0.522
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.