STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZBTB33Transcriptional regulator Kaiso. (688 aa)    
Predicted Functional Partners:
CTNND1
Catenin delta-1.
    
 
 0.691
ARVCF
Armadillo repeat protein deleted in velo-cardio-facial syndrome.
    
 
 0.691
SOWAHC
Ankyrin repeat domain-containing protein SOWAHC.
    
 0.555
RCOR3
REST corepressor 3.
    
 0.530
CREB3
Cyclic AMP-responsive element-binding protein 3.
     
 0.518
CTNND2
Catenin delta-2.
    
 
 0.496
LOC110469820
Catenin delta-2-like.
    
 
 0.496
PKP4
Plakophilin-4.
    
 
 0.496
E2F6
Transcription factor E2F6.
    
 
 0.490
TFAP2D
Transcription factor AP-2-delta.
    
 
 0.456
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.