STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NXPH1_0Neurexophilin; May be signaling molecules that resemble neuropeptides. (216 aa)    
Predicted Functional Partners:
LGI2
Leucine-rich repeat LGI family member 2.
  
   
 0.534
TNNC2
Troponin C, skeletal muscle.
      
 0.525
TAFA1
Protein FAM19A1.
  
   
 0.511
BRINP2
BMP/retinoic acid-inducible neural-specific protein 2.
  
     0.498
CRYBA1
Beta-crystallin A3; Belongs to the beta/gamma-crystallin family.
  
     0.446
PDE6H
Retinal cone rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit gamma.
  
     0.441
MFAP3
Microfibril-associated glycoprotein 3.
  
     0.441
CRHR2_0
Corticotropin-releasing factor receptor 2.
  
    0.441
GABRA3_1
Gamma-aminobutyric acid receptor subunit alpha-3.
  
   
 0.424
TMEM263_0
Transmembrane protein 263.
  
     0.422
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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