Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
AP5S1AP-5 complex subunit sigma-1. (169 aa)    
Predicted Functional Partners:
AP5M1
AP-5 complex subunit mu-1; Belongs to the adaptor complexes medium subunit family.
    
 0.952
SPG11
SPG11 vesicle trafficking associated, spatacsin.
    
 
 0.925
ENSLSDP00000016812
annotation not available
    
 
 0.900
AP5Z1
AP-5 complex subunit zeta-1.
    
 0.840
ZBTB3
Zinc finger and BTB domain-containing protein 3.
      
 0.769
ZFYVE26
Zinc finger FYVE domain-containing protein 26.
    
 
 0.749
ZNF367
Zinc finger protein 367.
      
 0.733
SH3TC2
SH3 domain and tetratricopeptide repeat-containing protein 2.
      
 0.706
RSRP1
Arginine/serine-rich protein 1.
      
 0.682
TBC1D31
TBC1 domain family member 31.
      
 0.680
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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