Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CFAP43Cilia-and flagella-associated protein 43. (355 aa)    
Predicted Functional Partners:
CCDC40
Coiled-coil domain-containing protein 40.
   
 
 0.968
CFAP44
Cilia-and flagella-associated protein 44.
   
 
 0.950
TTC29
Tetratricopeptide repeat protein 29.
   
 
 0.942
TEKT2
Tektin-2.
   
 
 0.914
CFAP58
Cilia-and flagella-associated protein 58.
   
 
 0.909
EFHC2
EF-hand domain-containing family member C2.
   
 
 0.899
CFAP57
Cilia-and flagella-associated protein 57.
   
 
 0.898
CFAP61
Cilia-and flagella-associated protein 61.
   
 
 0.898
MAATS1
Protein MAATS1.
   
 
 0.889
CCDC65
Coiled-coil domain-containing protein 65.
   
 
 0.879
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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