Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC110480432Uncharacterized protein KIAA1211-like. (532 aa)    
Predicted Functional Partners:
MRPL30
39S ribosomal protein L30, mitochondrial.
      
 0.873
AKAP17A
A-kinase anchor protein 17A.
      
 0.795
CYB5D2
Neuferricin; Belongs to the cytochrome b5 family.
      
 0.566
PACC1
Transmembrane protein 206.
      
 0.446
ICOSLG
ICOS ligand.
  
     0.422
CHIC1
Cysteine-rich hydrophobic domain-containing protein 2.
      
 0.408
CMYA5
Cardiomyopathy-associated protein 5.
  
     0.407
LARP1B
La-related protein 1B.
      
 0.401
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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