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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
COMTD1Catechol O-methyltransferase domain-containing protein 1. (257 aa)    
Predicted Functional Partners:
TK1
Thymidine kinase.
  
 
  0.685
ASMTL
N-acetylserotonin O-methyltransferase-like protein.
     
 0.598
DUS2
tRNA-dihydrouridine(20) synthase [NAD(P)+]-like.
   
  
 0.591
MAP6D1
MAP6 domain-containing protein 1.
    
 
 0.571
MAT2A
S-adenosylmethionine synthase; Catalyzes the formation of S-adenosylmethionine from methionine and ATP.
  
 
 0.566
MAT1A
S-adenosylmethionine synthase; Catalyzes the formation of S-adenosylmethionine from methionine and ATP.
  
 
 0.566
TMC7
Transmembrane channel-like protein.
   
  
 0.565
LOC110480328
D(1) dopamine receptor-like.
    
 
 0.534
DISP2
Protein dispatched 2.
      
 0.524
MDN1
Midasin; Nuclear chaperone required for maturation and nuclear export of pre-60S ribosome subunits; Belongs to the complex I LYR family.
      
 0.520
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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