Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
FAM199XProtein FAM199X. (383 aa)    
Predicted Functional Partners:
PDPK1
3-phosphoinositide-dependent protein kinase 1.
    
   0.847
WDR5
WD repeat-containing protein 5.
    
   0.836
MBIP
MAP3K12-binding inhibitory protein 1.
    
   0.642
GCNT2
N-acetyllactosaminide beta-1,6-N-acetylglucosaminyl-transferase.
      
 0.560
GCNT7
Beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase 7.
      
 0.560
LOC110480034
Cryptochrome-1.
    
   0.509
CRY1
Cryptochrome-1.
    
   0.509
ZNF710
Zinc finger protein 710.
      
 0.449
HEATR5A
HEAT repeat-containing protein 5A.
      
 0.438
KIAA1958
Uncharacterized protein KIAA1958.
      
 0.434
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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