Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC110480306Cytochrome P450 2G1. (494 aa)    
Predicted Functional Partners:
LOC110481678
Cytochrome P450 3A13.
  
0.950
LOC110481576
Cytochrome P450 3A40; Belongs to the cytochrome P450 family.
  
0.946
CYP7A1
Cholesterol 7-alpha-monooxygenase; Belongs to the cytochrome P450 family.
  
 
 0.943
CYP26B1
Cytochrome P450 26B1; Belongs to the cytochrome P450 family.
  
0.935
LOC110475813
Cytochrome P450 26A1; Belongs to the cytochrome P450 family.
  
0.928
LOC110471710
UDP-glucuronosyltransferase 2A2 isoform X1.
   
 0.921
ALOX5
Arachidonate 5-lipoxygenase.
    
 0.920
LOC110480744
3 beta-hydroxysteroid dehydrogenase/Delta 5-->4-isomerase.
   
 0.919
LOC110475456
UDP-glucuronosyltransferase 1-6.
   
 0.917
ALDH1A1
Retinal dehydrogenase 1; Belongs to the aldehyde dehydrogenase family.
   
 0.916
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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