STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC110476439Heat shock protein HSP 90-alpha. (699 aa)    
Predicted Functional Partners:
PTGES3
Prostaglandin E synthase 3.
   
 0.916
SUGT1
Suppressor of G2 allele of SKP1.
   
 0.854
PTGES3L
CS domain-containing protein.
   
 0.829
LOC110483475
Serine/threonine-protein phosphatase.
   
 0.826
TSC2
Tuberin.
   
 0.812
ENSLSDP00000008723
annotation not available
   
 0.811
FKBP5
Peptidylprolyl isomerase.
   
 0.811
TTC28
Tetratricopeptide repeat protein 28.
   
 0.811
NR3C1
Glucocorticoid receptor.
    
 0.798
FKBP4
Peptidylprolyl isomerase.
   
 0.792
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.