Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TFGProtein TFG. (148 aa)    
Predicted Functional Partners:
SEC31B
Protein transport protein Sec31B.
   
 0.875
SEC31A
Protein transport protein Sec31A.
   
 0.875
ANXA11
Annexin.
   
 0.854
TRAF3
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
    
  0.853
SEC16A
Protein transport protein sec16; Plays a role in the organization of the endoplasmic reticulum exit sites (ERES), also known as transitional endoplasmic reticulum (tER). Required for secretory cargo traffic from the endoplasmic reticulum to the Golgi apparatus.
    
 0.832
SEC16B
Protein transport protein sec16; Plays a role in the organization of the endoplasmic reticulum exit sites (ERES), also known as transitional endoplasmic reticulum (tER). Required for secretory cargo traffic from the endoplasmic reticulum to the Golgi apparatus.
    
 0.832
SEC13
Protein SEC13; Belongs to the WD repeat SEC13 family.
   
 0.800
TSNARE1_0
t-SNARE domain-containing protein 1.
    
 0.734
SEC24A
Protein transport protein Sec24A.
   
 0.645
SEC24B
Protein transport protein Sec24B.
   
 0.635
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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