STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
WDFY1WD repeat and FYVE domain-containing protein 1. (410 aa)    
Predicted Functional Partners:
TBC1D31
TBC1 domain family member 31.
     
 0.708
WDFY4
WD repeat-and FYVE domain-containing protein 4.
      
 0.672
MAD2L1
Mitotic spindle assembly checkpoint protein MAD2A.
   
 0.601
CDC16
Cell division cycle protein 16.
   
 0.591
TAF2
Transcription initiation factor TFIID subunit 2.
   
 0.582
TAF12
Transcription initiation factor TFIID subunit 12.
   
 0.581
LOC110474354
Transcription initiation factor TFIID subunit 9.
    
 0.580
TAF10
Transcription initiation factor TFIID subunit 10.
    
 0.579
IFT140
Intraflagellar transport protein 140.
    
 0.567
TAF1
Transcription initiation factor TFIID subunit.
   
 0.565
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.