STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSLSDP00000006830annotation not available (367 aa)    
Predicted Functional Partners:
CX057
Uncharacterized protein CXorf57.
 
     0.939
MLH1
DNA mismatch repair protein Mlh1.
    
   0.719
SMARCAL1
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1; Belongs to the SNF2/RAD54 helicase family. SMARCAL1 subfamily.
      
 0.565
ZRANB3
DNA annealing helicase and endonuclease ZRANB3.
      
 0.509
BRCA2
Breast cancer type 2 susceptibility.
      
 0.499
DNA2
DNA replication ATP-dependent helicase/nuclease DNA2.
      
 0.479
FBH1
F-box only protein 18.
      
 0.463
EXO1
Exonuclease 1.
      
 0.435
FANCD2
Fanconi anemia group D2 protein.
      
 0.432
MRNIP
MRN complex-interacting protein.
      
 0.418
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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