STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DOCK11Dedicator of cytokinesis protein 11; Belongs to the DOCK family. (2029 aa)    
Predicted Functional Partners:
CDC42
Cell division control protein 42.
   
 0.848
MET
Hepatocyte growth factor receptor.
   
 
 0.579
MST1R
Macrophage-stimulating protein receptor.
   
 
 0.579
RAC3
Ras-related C3 botulinum toxin substrate 3 isoform X1.
   
 0.526
RAC1
Ras-related C3 botulinum toxin substrate 1.
   
 0.526
RAC2
Ras-related C3 botulinum toxin substrate 2.
   
 0.526
ARID4A
AT-rich interactive domain-containing protein 4A.
      
 0.478
ARID4B
AT-rich interactive domain-containing protein 4B.
      
 0.478
ARHGEF16
Rho guanine nucleotide exchange factor 16.
     
 0.473
RHOH
Rho-related GTP-binding protein RhoH.
   
 0.445
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
Server load: low (40%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.