Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
FARSBPhenylalanine--tRNA ligase beta subunit. (589 aa)    
Predicted Functional Partners:
FARSA
Phenylalanine--tRNA ligase alpha subunit.
  
 0.999
FARS2
Phenylalanine--tRNA ligase, mitochondrial.
  
 0.991
EPRS1
Bifunctional glutamate/proline--tRNA ligase.
  
 
 0.933
EEF1B2
Elongation factor 1-beta; Belongs to the EF-1-beta/EF-1-delta family.
 
 
    0.923
IARS1
Isoleucine--tRNA ligase, cytoplasmic; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 
 0.907
FDXACB1
Ferredoxin-fold anticodon-binding domain-containing protein 1.
  
 0.877
YARS1
Tyrosine--tRNA ligase.
  
  
 0.872
EIF2S3
Eukaryotic translation initiation factor 2 subunit 3.
  
  
 0.837
NARS1
Asparagine--tRNA ligase, cytoplasmic.
  
  
 0.827
AARS1
Alanine--tRNA ligase, cytoplasmic; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged tRNA(Ala) via its editing domain.
  
 
 0.783
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
Server load: low (14%) [HD]