Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
INAAlpha-internexin; Belongs to the intermediate filament family. (162 aa)    
Predicted Functional Partners:
ENSLSDP00000001974
annotation not available
   
 
 0.709
LOC110480152
Neurofilament light polypeptide; Belongs to the intermediate filament family.
   
 
 0.709
GAN
Kelch-like protein 16 (gigaxonin).
    
 
 0.699
TANA
Tanabin; Belongs to the intermediate filament family.
    
 0.607
GRIN1
Glutamate receptor ionotropic, NMDA 1.
   
  0.572
GFAP
Glial fibrillary acidic protein; Belongs to the intermediate filament family.
   
   0.540
PPP2R2C
Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B; Belongs to the phosphatase 2A regulatory subunit B family.
   
 0.452
CDK5
Cyclin-dependent-like kinase 5; Belongs to the protein kinase superfamily.
    
 
 0.431
HTR2A
5-hydroxytryptamine receptor 2A.
   
 
 0.424
SFRP2
Secreted frizzled-related protein 2.
    
 
 0.423
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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