STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RCAN1Calcipressin-1. (204 aa)    
Predicted Functional Partners:
PPP3R1
Calcineurin subunit B type 1.
    
 
 0.660
PPP3CB
Serine/threonine-protein phosphatase.
    
 
 0.616
PPP3CA
Serine/threonine-protein phosphatase.
    
 
 0.616
PPP3CC
Serine/threonine-protein phosphatase.
    
 
 0.616
TESC
Calcineurin B ous protein 3.
    
 
 0.430
CHP1
Calcineurin B ous protein 1.
    
 
 0.430
LOC110482800
Serine/threonine-protein phosphatase.
    
 
 0.413
PPP1CB
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
    
 
 0.413
DYRK1A
Dual specificity tyrosine-phosphorylation-regulated kinase 1A.
    
 
 0.404
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
Server load: medium (52%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.