Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
FRMD7FERM domain-containing protein 7. (694 aa)    
Predicted Functional Partners:
GPR143
G-protein coupled receptor 143.
      
 0.730
VCAN
Versican core protein.
      
 0.660
HPS5
Hermansky-Pudlak syndrome 5 protein homolog; May regulate the synthesis and function of lysosomes and of highly specialized organelles, such as melanosomes and platelet dense granules.
      
 0.651
ITSN2
Intersectin-2.
     
 0.595
GGCX
Vitamin K-dependent gamma-carboxylase.
      
 0.578
PLEKHH3
Unconventional myosin-X.
      
 0.569
RP1L1
Retinitis pigmentosa 1-like 1 protein.
      
 0.569
LOC110482908
Phosphodiesterase.
      
 0.568
NYX
Nyctalopin.
      
 0.566
GRIFIN
Galectin.
      
 0.565
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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