STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NFKBIZNF-kappa-B inhibitor zeta. (699 aa)    
Predicted Functional Partners:
ENSLSDP00000010742
annotation not available
      
 0.602
AKIRIN2
Akirin-2.
    
 
 0.592
TNFAIP3
Tumor necrosis factor alpha-induced protein 3.
   
 
 0.558
RHEB
GTP-binding protein Rheb.
    
 0.456
SOCS3
Suppressor of cytokine signaling 3.
   
 
 0.451
ENSLSDP00000001617
annotation not available
    
 0.449
TRAF3IP2
Adapter protein CIKS.
    
 0.449
NFKBIA
NF-kappa-B inhibitor alpha.
   
 
0.444
IRAK4
Interleukin-1 receptor-associated kinase 4.
   
 0.437
IRF1
Interferon regulatory factor.
   
 0.422
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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