Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MFSD13ATransmembrane protein 180. (509 aa)    
Predicted Functional Partners:
MFSD11
UNC93-like protein MFSD11.
      
 0.678
MFSD9
Major facilitator superfamily domain-containing protein 9.
      
 0.601
MFSD6
Major facilitator superfamily domain-containing protein 6.
      
 0.589
MFSD5
Molybdate-anion transporter.
      
 0.587
SPNS3
Protein spinster 3.
      
 0.586
SLC37A3
Sugar phosphate exchanger 3.
      
 0.584
MFSD8
Major facilitator superfamily domain-containing protein 8.
   
  
 0.571
UNC93A
Protein unc-93 A.
      
 0.570
MFSD2B
Major facilitator superfamily domain containing 2B.
      
 0.569
SVOP
Synaptic vesicle 2-related protein.
      
 0.569
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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