Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
GPC4Glypican-4; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family. (561 aa)    
Predicted Functional Partners:
FZD7
Frizzled-7; Belongs to the G-protein coupled receptor Fz/Smo family.
     
 0.913
FZD1
Frizzled-1; Belongs to the G-protein coupled receptor Fz/Smo family.
     
 0.913
FZD2
Frizzled-2; Belongs to the G-protein coupled receptor Fz/Smo family.
     
 0.913
FZD4
Frizzled-4; Belongs to the G-protein coupled receptor Fz/Smo family.
     
 0.908
FZD8
Frizzled-8; Belongs to the G-protein coupled receptor Fz/Smo family.
     
 0.908
FZD3
Frizzled 3.
     
 0.908
FZD9
Frizzled-9; Belongs to the G-protein coupled receptor Fz/Smo family.
     
 0.908
LOC110484582
Frizzled-5; Belongs to the G-protein coupled receptor Fz/Smo family.
     
 0.908
FZD6
Frizzled-6; Belongs to the G-protein coupled receptor Fz/Smo family.
     
 0.907
SDC2
Syndecan; Cell surface proteoglycan; Belongs to the syndecan proteoglycan family.
    
 0.812
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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