STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MRPL4339S ribosomal protein L43, mitochondrial. (152 aa)    
Predicted Functional Partners:
MRPL49
39S ribosomal protein L49, mitochondrial.
   
 
 0.991
MRPL46
39S ribosomal protein L46, mitochondrial.
   
 
 0.990
MRPL34
39S ribosomal protein L34, mitochondrial.
   
 
 0.989
MRPS10
28S ribosomal protein S10, mitochondrial.
   
 
 0.989
MRPS16
28S ribosomal protein S16, mitochondrial.
   
 
 0.988
MRPL44
39S ribosomal protein L44, mitochondrial.
   
 
 0.987
MRPL13
39S ribosomal protein L13, mitochondrial.
   
 
 0.986
MRPL41
39S ribosomal protein L41, mitochondrial.
   
 
 0.986
MRPL11
39S ribosomal protein L11, mitochondrial.
   
 
 0.985
MRPL36
39S ribosomal protein L36, mitochondrial.
   
 
 0.985
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.