Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
MTRES1Uncharacterized protein C6orf203. (224 aa)    
Predicted Functional Partners:
C12orf65
Putative peptide chain release factor C12orf65, mitochondrial.
    
 0.881
LOC110475983
Cytochrome b-c1 complex subunit Rieske, mitochondrial; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
     
  0.759
MRPL47
39S ribosomal protein L47, mitochondrial.
    
  0.750
QRSL1
Glutamyl-tRNA(Gln) amidotransferase subunit A, mitochondrial; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in the mitochondria. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln). Belongs to the amidase family. GatA subfamily.
   
  
 0.739
MRPL58
Peptidyl-tRNA hydrolase ICT1, mitochondrial.
    
 0.714
MALSU1
Mitochondrial assembly of ribosomal large subunit protein 1.
    
 0.702
MRPL28
39S ribosomal protein L28, mitochondrial.
   
 0.673
MRPL2
39S ribosomal protein L2, mitochondrial.
   
 0.669
MRPL42
39S ribosomal protein L42, mitochondrial.
   
 0.663
SOBP
Sine oculis-binding.
      
 0.659
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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