STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MTRES1Uncharacterized protein C6orf203. (224 aa)    
Predicted Functional Partners:
C12orf65
Putative peptide chain release factor C12orf65, mitochondrial.
    
 
 0.690
MRPL58
Peptidyl-tRNA hydrolase ICT1, mitochondrial.
    
 
 0.678
SEC63
Translocation protein SEC63.
      
 0.672
MRPL11
39S ribosomal protein L11, mitochondrial.
    
 
 0.659
QRSL1
Glutamyl-tRNA(Gln) amidotransferase subunit A, mitochondrial; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in the mitochondria. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln). Belongs to the amidase family. GatA subfamily.
   
  
 0.646
MRPL33
39S ribosomal protein L33, mitochondrial.
    
   0.626
MRPL40
39S ribosomal protein L40, mitochondrial.
   
   0.623
MRPL9
39S ribosomal protein L9, mitochondrial.
   
   0.622
MRPL13
39S ribosomal protein L13, mitochondrial.
   
   0.616
MALSU1
Mitochondrial assembly of ribosomal large subunit protein 1.
    
 
 0.611
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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