STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VPS37BVacuolar protein sorting-associated protein 37B. (287 aa)    
Predicted Functional Partners:
TSG101
Tumor susceptibility gene 101 protein.
    
 0.997
VPS28
Vacuolar protein sorting-associated protein 28 homolog; Component of the ESCRT-I complex (endosomal sorting complex required for transport I), a regulator of vesicular trafficking process.
   
 0.994
MVB12B
Multivesicular body subunit 12B.
   
 0.988
VPS25
Vacuolar protein-sorting-associated protein 25.
    
 0.917
VPS36
Vacuolar protein-sorting-associated protein 36.
     
 0.899
SNF8
Vacuolar-sorting protein SNF8.
     
 0.885
LOC110473306
Charged multivesicular body protein 3.
     
 0.868
CHMP6
Charged multivesicular body protein 6.
     
 0.851
CHMP7
Charged multivesicular body protein 7.
     
 0.822
CHMP4B
Charged multivesicular body protein 4b.
     
 0.818
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.