STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEC63Translocation protein SEC63. (755 aa)    
Predicted Functional Partners:
SEC62
Translocation protein SEC62.
   
 0.999
SEC61A2
Protein transport protein Sec61 subunit alpha isoform 2.
   
 
 0.996
SEC61A1
Protein transport protein Sec61 subunit alpha isoform 1.
   
 
 0.996
SEC61G
Protein transport protein Sec61 subunit gamma.
    
 
 0.994
SEC61B
Protein transport protein Sec61 subunit beta; Necessary for protein translocation in the endoplasmic reticulum.
    
 
 0.994
HSPA5
Glucose-regulated protein; Belongs to the heat shock protein 70 family.
  
 
 0.960
HYOU1
Hypoxia up-regulated protein 1.
  
 
 0.851
DNAJC3
DnaJ subfamily C member 3.
   
 
 0.793
STRADB
STE20-related kinase adapter protein beta.
    
 
 0.782
STRADA
STE20-related kinase adapter protein alpha.
    
 
 0.782
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.