STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FBXW4F-box/WD repeat-containing protein 4 isoform X1. (408 aa)    
Predicted Functional Partners:
CUL1
Cullin-1; Belongs to the cullin family.
    
 0.805
SKP1
S-phase kinase-associated protein 1; Belongs to the SKP1 family.
    
 0.803
CUL3
Cullin-3; Belongs to the cullin family.
    
  0.638
UBFD1
Ubiquitin domain-containing protein UBFD1.
      
 0.569
CCT5
T-complex protein 1 subunit epsilon.
    
 0.552
TXNDC9
Thioredoxin domain-containing protein 9.
    
   0.547
CACUL1
CDK2-associated and cullin domain-containing protein 1; Belongs to the cullin family.
    
  0.542
POLL
DNA polymerase lambda; Belongs to the DNA polymerase type-X family.
 
    
 0.536
FBXW5
F-box/WD repeat-containing protein 5.
     
 0.525
POLL-2
DNA polymerase lambda.
 
    
 0.516
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.