STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LAS1LRibosomal biogenesis protein LAS1L. (583 aa)    
Predicted Functional Partners:
NOL9
Polynucleotide 5'-hydroxyl-kinase NOL9.
   
 0.979
TEX10
Testis-expressed sequence 10.
   
 0.944
WDR18
WD repeat-containing protein 18.
   
 0.925
SENP3
Sentrin-specific protease 3.
   
 0.766
SENP5
Sentrin-specific protease 5.
   
 0.766
PES1
Pescadillo homolog; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
 
  0.699
EBNA1BP2
Putative rRNA-processing protein EBP2.
   
 
  0.684
GNL3
Guanine nucleotide-binding protein-like 3.
   
 
  0.677
WDR12
Ribosome biogenesis protein WDR12; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
 
  0.627
EXOSC10
Exosome component 10.
   
 
 0.609
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.