STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LDB1LIM domain-binding protein 1. (416 aa)    
Predicted Functional Partners:
TAL1
T-cell acute lymphocytic leukemia protein 1.
    
 0.887
LMO2
Rhombotin-2.
    
 0.873
LMO3
LIM domain only protein 3.
    
 0.836
LMO1
Rhombotin-1.
    
 0.836
SSBP2
Single-stranded DNA-binding protein 2.
   
 
 0.730
SSBP3
Single-stranded DNA-binding protein 3.
   
 
 0.730
LHX9
LIM/homeobox protein Lhx9.
    
 0.707
LHX2
LIM/homeobox protein Lhx2.
    
 0.707
GATA3
GATA-binding factor 3.
    
 0.679
ISL1
Insulin gene enhancer protein ISL-1.
    
 0.672
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.