Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSLSDP00000007153annotation not available (349 aa)    
Predicted Functional Partners:
C1QA
Complement C1q subcomponent subunit A.
   
  
 0.864
C1QC
Complement C1q subcomponent subunit C isoform X2.
   
  
 0.846
LOC110474966
Folate receptor alpha.
   
  
 0.525
LOC110468582
Complement C4.
    
 
 0.495
C3
Complement C3.
    
 
 0.495
SRGN
Serglycin.
   
  
 0.463
CSF1R
Macrophage colony-stimulating factor 1 receptor; Belongs to the protein kinase superfamily. Tyr protein kinase family. CSF-1/PDGF receptor subfamily.
   
  
 0.439
ADGRL3
Latrophilin-3; Belongs to the G-protein coupled receptor 2 family.
    
   0.428
ADGRL2
Latrophilin-2; Belongs to the G-protein coupled receptor 2 family.
    
   0.428
SLC31A2
Solute carrier family 31 member 2.
      
 0.421
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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