STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TRA2BTransformer-2 beta. (289 aa)    
Predicted Functional Partners:
SRSF3
Serine/arginine-rich splicing factor 3.
   
 0.974
SRSF2
Serine/arginine-rich splicing factor 2.
  
0.947
SRSF1
Serine/arginine-rich splicing factor 1.
   
 0.941
LOC110474841
Serine/arginine-rich splicing factor 7.
   
 0.887
SRSF7
Serine/arginine-rich splicing factor 7.
   
 0.887
SRSF10
Serine/arginine-rich splicing factor 10.
   
0.869
HNRNPK
Heterogeneous nuclear ribonucleoprotein K.
   
 0.827
HNRNPA2B1
Heterogeneous nuclear ribonucleoproteins A2/B1.
  
0.806
HNRNPC
Heterogeneous nuclear ribonucleoprotein C-like 1.
   
 0.798
RBMX
RNA-binding motif protein, X chromosome isoform X1.
  
0.741
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.