STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC110482476Aurora kinase B; Belongs to the protein kinase superfamily. (418 aa)    
Predicted Functional Partners:
INCENP
Inner centromere protein.
   
 0.947
CDCA8
Cell division cycle associated 8.
   
 0.905
BIRC6
Baculoviral IAP repeat-containing protein 6.
   
 0.894
TPX2
Targeting protein for Xklp2.
   
 0.894
LOC110484624
Baculoviral IAP repeat-containing protein 5.1.
   
 0.850
BIRC5
Baculoviral IAP repeat-containing protein 5-like.
   
 0.850
UBE2C
Ubiquitin-conjugating enzyme E2 C; Belongs to the ubiquitin-conjugating enzyme family.
   
 0.834
CDK1
Cyclin-dependent kinase 1; Belongs to the protein kinase superfamily.
  
0.819
NDC80
Kinetochore protein NDC80.
   
 
 0.805
CDC20
Cell division cycle protein 20.
   
 0.793
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.